The detailed information of tRNA gene sequence


Sequence ID>WENV170701389
Genome IDLKGT01008139
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 5210
End posion on genome 5283
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgagcagcac
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTAtcg
Downstream region at tRNA end position 
aaagcccggg
Secondary structure (Cloverleaf model)
>WENV170701389	Met	CAT
                   c      Atcg aaagcccggg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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