The detailed information of tRNA gene sequence


Sequence ID>WENV170701428
Genome IDLKGT01008841
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 1971
End posion on genome 2047
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggtgcgttt
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
atgcttttcc
Secondary structure (Cloverleaf model)
>WENV170701428	Trp	CCA
                   t      GCCA atgcttttcc
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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