The detailed information of tRNA gene sequence


Sequence ID>WENV170701456
Genome IDLKGT01009193
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 2980
End posion on genome 3056
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggtgcgttt
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
aggcttttcc
Secondary structure (Cloverleaf model)
>WENV170701456	Trp	CCA
                   t      GCCA aggcttttcc
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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