The detailed information of tRNA gene sequence


Sequence ID>PHG0100008
Genome IDAF011378
Search identical group
Phylum/ClassSiphoviridae
SpeciesLactococcus virus sk1 Sfi21 (AF011378)
Start position on genome 27504
End posion on genome 27576
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
tttgcatatT
tRNA gene sequence
GCGAGCATAGTATAATGGTAATGCTACAGATTCCAAACCTGTAAACGTGGGTTCGATTCC
TACTGTTCGTGTtc
Downstream region at tRNA end position
tcctttattt
Secondary structure (Cloverleaf model)
>PHG0100008	Trp	CCA
                   T      GTtc tcctttattt
                     G + T
                     C - G
                     G - C
                     A - T
                     G + T
                     C - G
                     A - T          T T
                    T     C A T C C     A
        A A        A      | | + | |     G
      T     T A T G       G T G G G     C
      G     | | + |                 T T
      G     A T G C
        T A        T     AAAC
                    A - T
                    C - G
                    A - T
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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