The detailed information of tRNA gene sequence


Sequence ID>WENV170701508
Genome IDLKGT01009970
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 2250
End posion on genome 2323
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catctgctta
tRNA gene sequence 
GGGCCCGTAACTCAGCTTGGTAGAGTAACCGGCTCATAACCGGTGAGCCAAGGGATCGAA
GCCCTTCGGGCCCAthy
Downstream region at tRNA end position 
yatnnccatt
Secondary structure (Cloverleaf model)
>WENV170701508	Met	CAT
                   a      Athy yatnnccatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          G A
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C A       A A G G G     C
    T       | | | |                 A T
    G       G A G T
      G T A        A     GAGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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