The detailed information of tRNA gene sequence


Sequence ID>WENV170701527
Genome IDLKGT01010338
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 15148
End posion on genome 15234
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcatctttgt
tRNA gene sequence 
GCGGGGATCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATTCCATGTTCGCAAGGACACG
GGGGTTCGAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
tgaaaaatta
Secondary structure (Cloverleaf model)
>WENV170701527	Ser	GCT
                   t      GCCA tgaaaaatta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        C      | | | | |     G
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGGACAC
                    T - A
                    G - C
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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