The detailed information of tRNA gene sequence


Sequence ID>WENV170701528
Genome IDLKGT01010339
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 5125
End posion on genome 5201
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tccgcgagtt
tRNA gene sequence 
GGGCTAGTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCCTGGCCCACCA
Downstream region at tRNA end position 
cttcccgcgc
Secondary structure (Cloverleaf model)
>WENV170701528	Ile	GAT
                   t      ACCA cttcccgcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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