The detailed information of tRNA gene sequence


Sequence ID>WENV170701569
Genome IDLKGT01010901
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 4306
End posion on genome 4230
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acacgactgt
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCCCCCGCTACCA
Downstream region at tRNA end position 
ctcaagcggt
Secondary structure (Cloverleaf model)
>WENV170701569	Met	CAT
                   t      ACCA ctcaagcggt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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