The detailed information of tRNA gene sequence


Sequence ID>WENV170701578
Genome IDLKGT01011054
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 8350
End posion on genome 8274
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cntctgannc
tRNA gene sequence 
GGGCTGGTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCCCGGCCCACCA
Downstream region at tRNA end position 
attcagannn
Secondary structure (Cloverleaf model)
>WENV170701578	Ile	GAT
                   c      ACCA attcagannn
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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