The detailed information of tRNA gene sequence


Sequence ID>WENV170701580
Genome IDLKGT01011054
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 4570
End posion on genome 4494
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgaccctgg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCAGGTTCGAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
acctgtccga
Secondary structure (Cloverleaf model)
>WENV170701580	Met	CAT
                   g      ACCA acctgtccga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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