The detailed information of tRNA gene sequence


Sequence ID>WENV170701583
Genome IDLKGT01011079
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 11741
End posion on genome 11817
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tctgataatt
tRNA gene sequence 
GGGCCGGTCGTCTAGTCTGGTAGGATAGGTGCATGGCATGCATCGGATCAAGGGTTCAAA
TCCCTTCCGGTCCACTA
Downstream region at tRNA end position 
tttctttttc
Secondary structure (Cloverleaf model)
>WENV170701583	Ala	GGC
                   t      ACTA tttctttttc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        C      | | | | |     A
    C       T C T G       A A G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        A     GGATC
                    G - C
                    G + T
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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