The detailed information of tRNA gene sequence


Sequence ID>WENV170702080
Genome IDLKMJ01000477
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 12573
End posion on genome 12487
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgcgtgcga
tRNA gene sequence 
GTCGTGGTAGCCAAGCCTGGCCCAAGGCGCAGGGTTGCTAACTCTGTGGCGCAAGCCTCC
GGGGTTCAAATCCCCGCCACGACGCTA
Downstream region at tRNA end position 
atcgaatcca
Secondary structure (Cloverleaf model)
>WENV170702080	Ser	GCT
                   a      GCTA atcgaatcca
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  T         A C C G       C G G G G     C
  G           | | |                 T T
  G         A G G C
    C C C A        G     TGGCGCAAGCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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