The detailed information of tRNA gene sequence


Sequence ID>WENV170702880
Genome IDLKMJ01004460
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 13047
End posion on genome 13135
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagattaaaT
tRNA gene sequence 
GGAAAGGTGGCAGAGTGGTTAATTGCACCAATTTTGAAAATTGGCGTGGCTTTGCGGTCA
CCGGGGGTTCGAATCCCTCCCTTTCCGAta
Downstream region at tRNA end position 
aaaaatcaaa
Secondary structure (Cloverleaf model)
>WENV170702880	Ser	TGA
                   T      GAta aaaaatcaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      T A A        A     CGTGGCTTTGCGGTCACC
                    C - G
                    C - G
                    A - T
                    A - T
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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