The detailed information of tRNA gene sequence


Sequence ID>WENV170703029
Genome IDLKMJ01005679
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 8388
End posion on genome 8475
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttgtttgtt
tRNA gene sequence 
GGGAGAGTGTCCGAATCTGGTAAGGGGAATGGTTGCTAACCATTTTAAACCGAAAGGTGT
GTGGGTTCAAATCCCGCCTCTCCCGCCA
Downstream region at tRNA end position 
tttgaatatt
Secondary structure (Cloverleaf model)
>WENV170703029	Ser	GCT
                   t      GCCA tttgaatatt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C G C C C     A
      T A A        G      | + | | |     A
    C       G C C T       G T G G G     C
    T         | | +                 T T
    G       A G G G
      G T A        G     TTAAACCGAAAGGTGT
                    A - T
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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