The detailed information of tRNA gene sequence


Sequence ID>WENV170705190
Genome IDLLEQ01000189
Search identical group
Phylum/Class[LLEQ] bioreactor metagenome; day86 25degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
Species
Start position on genome 4906
End posion on genome 4996
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agacccccgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGGCGGTCTCGAAAACCGTTGACCCTGCAAGGGG
TCCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
cagtattctt
Secondary structure (Cloverleaf model)
>WENV170705190	Ser	CGA
                   c      GCCA cagtattctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
    G T G A        G      | | | | |     G
  G         G G C C       C A G G G     C
  T         |   | |                 T T
  C         C G G G
    G A A          G     TGACCCTGCAAGGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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