The detailed information of tRNA gene sequence


Sequence ID>WENV170705632
Genome IDLNAP01000036
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 5030
End posion on genome 5119
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttccaacagc
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGCCTGCAAGGGTA
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
gtcaagtcaa
Secondary structure (Cloverleaf model)
>WENV170705632	Ser	TGA
                   c      GCCA gtcaagtcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGCCTGCAAGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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