The detailed information of tRNA gene sequence


Sequence ID>WENV170705696
Genome IDLNAP01000136
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 61409
End posion on genome 61502
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggccctaac
tRNA gene sequence 
GGAGCTGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATAGGGTTGTAAAGC
CCTATCGAGGGTTCGAATCCCTCCGGCTCCGCCA
Downstream region at tRNA end position 
cttcggaaca
Secondary structure (Cloverleaf model)
>WENV170705696	Ser	GCT
                   c      GCCA cttcggaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTGTAAAGCCCTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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