The detailed information of tRNA gene sequence


Sequence ID>WENV170705790
Genome IDLNAP01000308
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 68287
End posion on genome 68376
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gacgagattc
tRNA gene sequence 
GGTGAGGTGTCCGAGAGGCTTAAGGAGCACGCCTGGAAAGTGTGTATACAAGAAATTGTA
TCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tattagaaac
Secondary structure (Cloverleaf model)
>WENV170705790	Ser	GGA
                   c      GCCA tattagaaac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TATACAAGAAATTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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