The detailed information of tRNA gene sequence


Sequence ID>WENV170705882
Genome IDLNAP01000566
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 34024
End posion on genome 33935
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgtcgatcc
tRNA gene sequence 
GGTGAGGTGTCCGAGCGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTA
TCAAGGGTTCGAATCCCTTCCTCACCGCCA
Downstream region at tRNA end position 
tattcgattc
Secondary structure (Cloverleaf model)
>WENV170705882	Ser	GGA
                   c      GCCA tattcgattc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       A A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGAGAAATCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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