The detailed information of tRNA gene sequence


Sequence ID>WENV170705904
Genome IDLNAP01000602
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 38352
End posion on genome 38441
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgcgccgct
tRNA gene sequence 
GGAGAGATGCCGGAGTGGCCGAACGGGACGGATTCGAAATCCGTTGTACCCTCGCGGGTA
CCTAGGGTTCAAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
ctatacaaaa
Secondary structure (Cloverleaf model)
>WENV170705904	Ser	CGA
                   t      GCCA ctatacaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G G C C       T A G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTACCCTCGCGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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