The detailed information of tRNA gene sequence


Sequence ID>WENV170705981
Genome IDLNAP01000768
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 35554
End posion on genome 35464
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nngcatcagc
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTTTAGGATAATATCCT
AACGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tacatcaagc
Secondary structure (Cloverleaf model)
>WENV170705981	Ser	GGA
                   c      GCCA tacatcaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTTAGGATAATATCCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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