The detailed information of tRNA gene sequence


Sequence ID>WENV170705992
Genome IDLNAP01000790
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 44094
End posion on genome 44004
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnncatcagc
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTTTAGGATAATATCCT
AACGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gacatcttga
Secondary structure (Cloverleaf model)
>WENV170705992	Ser	GGA
                   c      GCCA gacatcttga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTTAGGATAATATCCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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