The detailed information of tRNA gene sequence


Sequence ID>WENV170706020
Genome IDLNAP01000847
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 49185
End posion on genome 49261
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccttcttgt
tRNA gene sequence 
CGGAGTGTGGCTCAGCCCGGTAGAGCACTGCGTTCGGGACGCAGGGGTCGCAGGTTCAAA
TCCTGCCACTCCGACCA
Downstream region at tRNA end position 
gaaatcatta
Secondary structure (Cloverleaf model)
>WENV170706020	Pro	CGG
                   t      ACCA gaaatcatta
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C T C G       G C A G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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