The detailed information of tRNA gene sequence


Sequence ID>WENV170706115
Genome IDLNAP01001184
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 34494
End posion on genome 34581
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caacacaaac
tRNA gene sequence 
GGAGGTGTGGCCGAGTGGTTTAAGGCAACGGTCTTGAAAACCGTCGACTGTAACAGGTCC
ATGAGTTCGAATCCCATCGCCTCCGCCA
Downstream region at tRNA end position 
tcttnnnnnn
Secondary structure (Cloverleaf model)
>WENV170706115	Ser	TGA
                   c      GCCA tcttnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | |   |     G
    G       G C C G       A T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGACTGTAACAGGTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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