The detailed information of tRNA gene sequence


Sequence ID>WENV170706229
Genome IDLNAP01001760
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 19657
End posion on genome 19568
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcttcatgc
tRNA gene sequence 
GGAGGTGTGGCCGAGTGGTTGAAGGCAGCGGTCTTGAAAACCGCCGAAGGGGAGACTCTT
CCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
tctgcatgat
Secondary structure (Cloverleaf model)
>WENV170706229	Ser	TGA
                   c      GCCA tctgcatgat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGAAGGGGAGACTCTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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