The detailed information of tRNA gene sequence


Sequence ID>WENV170706464
Genome IDLNAP01003257
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 15414
End posion on genome 15338
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cagccgacgc
tRNA gene sequence 
GCAGTGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTGCGCCA
Downstream region at tRNA end position 
tatccagcct
Secondary structure (Cloverleaf model)
>WENV170706464	Asp	GTC
                   c      GCCA tatccagcct
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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