The detailed information of tRNA gene sequence


Sequence ID>WENV170706465
Genome IDLNAP01003258
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 5703
End posion on genome 5628
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtcgctgcag
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGTAGGTTCGAGT
CCTACCGGGCCCACCA
Downstream region at tRNA end position 
gccttcgctt
Secondary structure (Cloverleaf model)
>WENV170706465	Met	CAT
                   g      ACCA gccttcgctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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