The detailed information of tRNA gene sequence


Sequence ID>WENV170706550
Genome IDLNAP01004157
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 13506
End posion on genome 13416
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnncatcagc
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTTTAGGATAATATCCT
AACGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ggattataag
Secondary structure (Cloverleaf model)
>WENV170706550	Ser	GGA
                   c      GCCA ggattataag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTTAGGATAATATCCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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