The detailed information of tRNA gene sequence


Sequence ID>WENV170706702
Genome IDLNAP01005735
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 3469
End posion on genome 3561
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
caacgatcac
tRNA gene sequence 
GCCCCCGTAGCTCAATTGGTAGAGCAGCGGATTTATATCCCGTCAGCGCCAGATAAGCGG
CAAGTGCCGGTTCGATCCCGGCCGGGGGCACCA
Downstream region at tRNA end position 
ttccgccact
Secondary structure (Cloverleaf model)
>WENV170706702	Ile	TAT
                   c      ACCA ttccgccact
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     C G G C C     A
      T A A        A      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CAGCGCCAGATAAGCGGCAAGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A   C
                  T       T
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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