The detailed information of tRNA gene sequence


Sequence ID>WENV170706799
Genome IDLNAP01006848
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 698
End posion on genome 624
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gatgtgcgac
tRNA gene sequence 
GGGTGATTAGCTCAGCGGTAGAGCACTGCCTTCACACGGCAGGGGTCACATGTTCGATCC
ATGTATCACCCACCA
Downstream region at tRNA end position 
attcaaccct
Secondary structure (Cloverleaf model)
>WENV170706799	Val	CAC
                   c      ACCA attcaaccct
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          C T
                    T     T G T A C     A
        G A        A      | | | | |     G
      C     C T C G       A C A T G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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