The detailed information of tRNA gene sequence


Sequence ID>WENV170706940
Genome IDLNAP01009416
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 7731
End posion on genome 7655
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgaccaatg
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCAAG
TCCGTGTGGGCCCACCA
Downstream region at tRNA end position 
gaattgtcag
Secondary structure (Cloverleaf model)
>WENV170706940	Met	CAT
                   g      ACCA gaattgtcag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G T G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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