The detailed information of tRNA gene sequence


Sequence ID>WENV170706966
Genome IDLNAP01010005
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 5112
End posion on genome 5188
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcccgacttt
tRNA gene sequence 
GGGCTAGTAGCTCAGCTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAGGTTCAAA
TCCTCCCTGGCCCACCA
Downstream region at tRNA end position 
tccttcgcgc
Secondary structure (Cloverleaf model)
>WENV170706966	Ile	GAT
                   t      ACCA tccttcgcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T A
                    T     C C T C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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