The detailed information of tRNA gene sequence


Sequence ID>WENV170707192
Genome IDLNAP01014992
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1566
End posion on genome 1640
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttgctcgcta
tRNA gene sequence 
GGGTGCTTAGCTCAGCGGTAGAGCGTCTCCTTTACACGGAGAGGGTCGGGGGTTCGAAAC
CCTCAGCACCCACCA
Downstream region at tRNA end position 
tgcaccagcg
Secondary structure (Cloverleaf model)
>WENV170707192	Val	TAC
                   a      ACCA tgcaccagcg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          A A
                    T     C T C C C     A
        G A        A      | + | | |     G
      C     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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