The detailed information of tRNA gene sequence


Sequence ID>WENV170707289
Genome IDLNAP01016707
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 3326
End posion on genome 3250
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttgagattt
tRNA gene sequence 
GGAGCGGTAGTTCAGCTGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCAAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
gtttcaagaa
Secondary structure (Cloverleaf model)
>WENV170707289	Asp	GTC
                   t      GCCA gtttcaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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