The detailed information of tRNA gene sequence


Sequence ID>WENV170707401
Genome IDLNAP01019580
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 2968
End posion on genome 2893
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgcgcctcct
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGTAGAGCGCCTCGTTCGCAATGAGGAGGTCAGGGGTTCGACT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
ggaatccgcc
Secondary structure (Cloverleaf model)
>WENV170707401	Ala	CGC
                   t      ACCA ggaatccgcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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