The detailed information of tRNA gene sequence


Sequence ID>WENV170707444
Genome IDLNAP01021027
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 3986
End posion on genome 4060
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcctactga
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGTAGGTTCGAG
TCCTACTGGGCCCACgc
Downstream region at tRNA end position 
aatgcgcggc
Secondary structure (Cloverleaf model)
>WENV170707444	Met	CAT
                   a      ACgc aatgcgcggc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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