The detailed information of tRNA gene sequence


Sequence ID>WENV170707471
Genome IDLNAP01021970
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 3888
End posion on genome 3801
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnncacaaac
tRNA gene sequence 
GGAGGTGTGGCCGAGTGGTTTAAGGCAACGGTCTTGAAAACCGTCGACTGTAACAGGTCC
ATGAGTTCGAATCCCATCGCCTCCGCCA
Downstream region at tRNA end position 
tcttatgtac
Secondary structure (Cloverleaf model)
>WENV170707471	Ser	TGA
                   c      GCCA tcttatgtac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | |   |     G
    G       G C C G       A T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGACTGTAACAGGTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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