The detailed information of tRNA gene sequence


Sequence ID>WENV170707525
Genome IDLNAP01023751
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 3688
End posion on genome 3613
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttgctttt
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATT
CCCTCCTGACCTGCCA
Downstream region at tRNA end position 
gattcattaa
Secondary structure (Cloverleaf model)
>WENV170707525	Trp	CCA
                   t      GCCA gattcattaa
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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