The detailed information of tRNA gene sequence


Sequence ID>WENV170707687
Genome IDLNAP01029712
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1174
End posion on genome 1082
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaggcgtat
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGCGGTCAAAAGCT
GCATCCGGGGTTCGAATCCCCGCCTCACCGCCA
Downstream region at tRNA end position 
tttaaaatgc
Secondary structure (Cloverleaf model)
>WENV170707687	Ser	GCT
                   t      GCCA tttaaaatgc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGTCAAAAGCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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