The detailed information of tRNA gene sequence


Sequence ID>WENV170707877
Genome IDLNAP01037585
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 2238
End posion on genome 2149
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnacacaca
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTAGTGGCAACACTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtatgcacaa
Secondary structure (Cloverleaf model)
>WENV170707877	Ser	CGA
                   a      GCCA gtatgcacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTAGTGGCAACACTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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