The detailed information of tRNA gene sequence


Sequence ID>WENV170707920
Genome IDLNAP01039904
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1535
End posion on genome 1624
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgacgact
tRNA gene sequence 
GGAGAGGTGTCTGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATATGAGCAATCGTA
TCGAGGGTTCGAACCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
cattaaacaa
Secondary structure (Cloverleaf model)
>WENV170707920	Ser	GGA
                   t      ACCA cattaaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          C A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TATATGAGCAATCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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