The detailed information of tRNA gene sequence


Sequence ID>WENV170707983
Genome IDLNAP01042824
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1855
End posion on genome 1942
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
gacagacacc
tRNA gene sequence
GGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACGGAAACGTACC
GAGGGTTCGAATCCCTCCCTCTCCTCCA
Downstream region at tRNA end position
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170707983	Ser	CGA
                   c      TCCA gnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTACGGAAACGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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