The detailed information of tRNA gene sequence


Sequence ID>WENV170708003
Genome IDLNAP01043921
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1615
End posion on genome 1539
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgcggcgat
tRNA gene sequence 
GGGCCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAC
TCCTCCCCGGCCCACCA
Downstream region at tRNA end position 
ttgcctgttc
Secondary structure (Cloverleaf model)
>WENV170708003	Ile	GAT
                   t      ACCA ttgcctgttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     C C T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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