The detailed information of tRNA gene sequence


Sequence ID>WENV170708023
Genome IDLNAP01044634
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1836
End posion on genome 1761
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attttgtttt
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATT
CCCTCCTGACCTGCCA
Downstream region at tRNA end position 
gattcacttg
Secondary structure (Cloverleaf model)
>WENV170708023	Trp	CCA
                   t      GCCA gattcacttg
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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