The detailed information of tRNA gene sequence


Sequence ID>WENV170708042
Genome IDLNAP01046028
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1554
End posion on genome 1480
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgatggtccc
tRNA gene sequence 
GGGCGCATAGCTCAGCGGGAGAGCGTTCCCTTCACACGGGAGAGGTCCAAGGTTCGATCC
CTTGTGCGCCCACCA
Downstream region at tRNA end position 
cgcttcgcca
Secondary structure (Cloverleaf model)
>WENV170708042	Val	CAC
                   c      ACCA cgcttcgcca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          C T
                    T     G T T C C     A
        G A        A      | | | | |     G
      C     C T C G       C A A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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