The detailed information of tRNA gene sequence


Sequence ID>WENV170708130
Genome IDLNAP01051545
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 115
End posion on genome 190
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccgacggac
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGTAGGTTCGAGT
CCTACCGGGCCCACCA
Downstream region at tRNA end position 
atctatacat
Secondary structure (Cloverleaf model)
>WENV170708130	Met	CAT
                   c      ACCA atctatacat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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