The detailed information of tRNA gene sequence


Sequence ID>WENV170708268
Genome IDLNAP01064509
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1174
End posion on genome 1098
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ncacatcaga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
gtttcaagca
Secondary structure (Cloverleaf model)
>WENV170708268	Met	CAT
                   a      ACCA gtttcaagca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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