The detailed information of tRNA gene sequence


Sequence ID>WENV170708290
Genome IDLNAP01066191
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 296
End posion on genome 372
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctcagttga
tRNA gene sequence 
TGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
ctattagaaa
Secondary structure (Cloverleaf model)
>WENV170708290	Met	CAT
                   a      ACCA ctattagaaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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