The detailed information of tRNA gene sequence


Sequence ID>WENV170708293
Genome IDLNAP01066444
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 434
End posion on genome 339
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cagtaccttc
tRNA gene sequence 
GGAAGGCATGCGCATCCGGGCATGCGGCTGGGCTTCAAACCCAGTAGGGGGCGTCGATCG
TTCCCTGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
atcgtgtttc
Secondary structure (Cloverleaf model)
>WENV170708293	SeC	TCA
                   c      GCCA atcgtgtttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C T        G      | + | | |     G
    G       A C G C       G T A G G     C
    G       | | | |                 T T
    G       T G C G
      C A          G     TAGGGGGCGTCGATCGTTCCCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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