The detailed information of tRNA gene sequence


Sequence ID>WENV170708342
Genome IDLNAP01071503
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 895
End posion on genome 984
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgcgcgacc
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGGGTGGAAGCTCA
CCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
cccggccagt
Secondary structure (Cloverleaf model)
>WENV170708342	Ser	TGA
                   c      GCCA cccggccagt
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGTGGAAGCTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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